研究活動
Research Activities

研究活動
Research Activities

Home › 研究活動 › 主任研究者 › 藤渕 航 教授

主任研究者
Principal Investigators

未来生命科学開拓部門 藤渕 航 教授

発表論文

Ying Chen, Kunie Sakurai, Sumihiro Maeda, Tohru Masui, Hideyuki Okano, Johannes Dewender, Stefanie Seltmann, Andreas Kurtz, Hiroshi Masuya, Yukio Nakamura, Michael Sheldon, Juliane Schneider, Glyn N. Stacey, Yulia Panina, Wataru Fujibuchi

Integrated Collection of Stem Cell Bank Data, a Data Portal for StandardizedStem Cell Information Stem Cell Reports, 16:1-9 (2021)

Yulia Panina, Junko Yamane, Kenta Kobayashi, Hideko Sone, Wataru Fujibuchi

Human ES and iPS cells display less drug resistance than differentiated cells, and naïve-state induction further decreases drug resistance The Journal of Toxicological Sciences, 46(3):131-142 (2021)

Yulia Panina, Peter Karagiannis, Andreas Kurtz, Glyn Stacey, Wataru Fujibuchi.

Human Cell Atlas and Cell Type Authentication for Regenerative Medicine NPJ Experimental & Molecular Medicine (2020)

Kouichi Tachibana, Junko Yamane, Seyed Mohammad Ali Haghparast, Jun Miyake

Sialomucin and phosphorylated-ERM are inhibitors for cadherin-mediated aggregate formation Biochemical and Biophysical Research Communications, 520(1):159-165 (2019)

Tomoya Mori, Haruka Takaoka, Junko Yamane, Cantas Alev, Wataru Fujibuchi.

Novel computational model of gastrula morphogenesis to identify spatial discriminator genes by self-organizing map (SOM) clustering Scientific Reports 9: Article number 12597 (2019)

Junko Yamane, Sachiyo Aburatani, Satoshi Imanishi, Hiromi Akanuma, Reiko Nagano, Tsuyoshi Kato, Hideko Sone, Seiichiroh Ohsako, Wataru Fujibuchi.

Prediction of developmental chemical toxicity based on gene networks of human embryonic stem cells Nucleic Acids Research 47(3): 1600 (2019) Corrigendum

山根 順子、藤渕 航

ヒトES細胞を用いた高精度な化合物毒性予測 谷本学校 毒性質問箱 20: 24-29 (2018)

Aiba T, Saito T, Hayashi A, Sato S, Yunokawa H, Maruyama T, Fujibuchi W, Ohsako S.

Does the prenatal bisphenol A exposure alter DNA methylation levels in the mouse hippocampus? : An analysis using a high-sensitivity methylome technique Genes and Environment 40: Article number 12 (2018)

山根 順子、油谷 幸代、今西 哲、赤沼 宏美、永野 麗子、加藤 毅、曽根 秀子、大迫 誠一郎、藤渕 航

ヒトES細胞を用いた高精度の化合物予測システムの構築 YAKUGAKU ZASSHI 138(6): 815-822 (2018)

Oshima K, Saiki N, Tanaka M, Imamura H, Niwa A, Tanimura A, Nagahashi A, Hirayama A, Okita K, Hotta A, Kitayama S, Osawa M, Kaneko S, Watanabe A, Asaka I, Fujibuchi W, Imai K, Yabe H, Kamachi Y, Hara J, Kojima S, Tomita M, Soga T, Noma T, Nonoyama S, Nakahata T, Saito MK.

Human AK2 links intracellular bioenergetic redistribution to the fate of hematopoietic progenitors Biochemical and biophysical research communications 497(2): 719-725 (2018)

Kurtz A, Seltmann S, Bairoch A, Bittner MS, Bruce K, Capes-Davis A, Clarke L, Crook JM, Daheron L, Dewender J, Faulconbridge A, Fujibuchi W, Gutteridge A, Hei DJ, Kim YO, Kim JH, Kokocinski AK, Lekschas F, Lomax GP, Loring JF, Ludwig T, Mah N, Matsui T, Müller R, Parkinson H, Sheldon M, Smith K, Stachelscheid H, Stacey G, Streeter I, Veiga A, Xu RH.

A Standard Nomenclature for Referencing and Authentication of Pluripotent Stem Cells Stem Cell Reports 10(1): 1-6 (2018)

Kim JH, Kurtz A, Yuan BZ, Zeng F, Lomax G, Loring JF, Crook J, Ju JH, Clarke L, Inamdar MS, Pera M, Firpo MT, Sheldon M, Rahman N, O'Shea O, Pranke P, Zhou Q, Isasi R, Rungsiwiwut R, Kawamata S, Oh S, Ludwig T, Masui T, Novak TJ, Takahashi T, Fujibuchi W, Koo SK, Stacey GN.

Report of the International Stem Cell Banking Initiative Workshop Activity: Current Hurdles and Progress in Seed-Stock Banking of Human Pluripotent Stem Cells. Stem Cells Translational Medicine 6(11):1956-1962 (2017).

Katayama H, Tamai K, Shibuya R, Nakamura M, Mochizuki M, Yamaguchi K, Kawamura S, Tochigi T, Sato I, Okanishi T, Sakurai K, Fujibuchi W, Arai Y, Satoh K.

Long non-coding RNA HOTAIR promotes cell migration by upregulating insulin growth factor-binding protein 2 in renal cell carcinoma. Scientific Reports 7(1):12016 (2017).

Iki T, Tanaka M, Kitajiri SI, Kita T, Kawasaki Y, Mizukoshi A, Fujibuchi W, Nakagawa T, Nakahata T, Ito J, Omori K, Saito MK.

Microarray analyses of otospheres derived from the cochlea in the inner ear identify putative transcription factors that regulate the characteristics of otospheres. PLOS ONE 12(6):e0179901 (2017).

Aiba T, Saito T, Hayashi A, Sato S, Yunokawa H, Maruyama T, Fujibuchi W, Kurita H, Tohyama C, Ohsako S.

Methylated Site Display (MSD)-AFLP, a sensitive and affordable method for analysis of CpG methylation profiles. BMC Molecular Biology 18(7) (2017).

Yamane J, Mori T, Taniyama N, Kobayashi K, Fujibuchi W.

Development of Enhanced Reduced Representation Bisulfite Sequencing Method for Single-cell Methylome Analysis. Genomics and Computational Biology 3(2):e49 (2017).

Sakurai K, Fujibuchi W.

Developing Global Cellular Information Retrieval System with Minimum Reporting Guidelines on Cellular Data for Regenerative Medicine. Genomics and Computational Biology 3(2):e50 (2017).

Mori T, Yamane J, Kobayashi K, Taniyama N, Tano T, Fujibuchi W.

Development of 3D Tissue Reconstruction Method from Single-cell RNA-seq Data. Genomics and Computational Biology 3(1):e53 (2017).

Sakurai K, Kurtz A, Stacey G, Sheldon M, Fujibuchi W.

First Proposal of Minimum Information About a Cellular Assay for Regenerative Medicine. Stem Cells Translational Medicine. 5(10): 1345-1361 (2016).

Yamane J, Aburatani S, Imanishi S, Akanuma H, Nagano R, Kato T, Sone H, Ohsako S, Fujibuchi W.

Prediction of Developmental Chemical Toxicity based on Gene Networks of Human Embryonic Stem Cells. Nucleic Acids Research. 44(12): 5515-5528 (2016).

Matsuda Y, Miura K, Yamane J, Shima H, Fujibuchi W, Ishida K, Fujishima F, Ohnuma S, Sasaki H, Nagao M, Tanaka N, Satoh K, Naitoh T, Unno M.

SERPINI1 regulates epithelial-mesenchymal transition in an orthotopic implantation model of colorectal cancer. Cancer Science. 107(5): 619-628 (2016).

Akiyama H, Ueda Y, Nobumasa H, Ooshima H, Ishizawa Y, Kitahiro K, Miyagawa I, Watanabe K, Nakamura T, Tanaka R, Yamamoto N, Nakae H, Kawase M, Gemma N, Sekiguchi Y, Fujibuchi W, Matoba R.

A set of external reference controls/probes that enable quality assurance between different microarray platforms. Analytical Biochemistry. 472: 75-83 (2015).

Tanaka T, Maeda Y, Veluchamy A, Tanaka M, Abida H, Maréchal E, Bowler C, Muto M, Sunaga Y, Tanaka M, Yoshino T, Taniguchi T, Fukuda Y, Nemoto M, Matsumoto M, Wong P.S, Aburatani S, Fujibuchi W.

Oil Accumulation by the Oleaginous Diatom Fistulifera solaris as Revealed by the Genome and Transcriptome. The Plant Cell. 27(1): 162-176 (2015).

Wong P.S, Tanaka M, Sunaga Y, Tanaka M, Taniguchi T, Yoshino T, Tanaka T, Fujibuchi W, Aburatani S.

Tracking difference in gene expression in a time-course experiment using gene set enrichment analysis. PLoS One. 9(9): e107629 (2014).

山根 順子、丸山 徹、藤渕 航

単細胞技術に基づくiPS細胞の標準化 生体の科学 65(2): 154-158 (2014).

Nakano S, Ikebe E, Tsukamoto Y, Wang Y, Matsumoto T, Mitsui T, Yahiro T, Inoue K, Kawazato H, Yasuda A, Ito K, Yokoyama S, Takahashi N, Hori M, Shimada T, Moriyama M, Kubota T, Ono K, Fujibuchi W, Jeang K.T, Iha H, Nishizono A.

Commensal microbiota contributes to chronic endocarditis in TAX1BP1 deficient mice. PLoS One. 8(9): e73205 (2013).

Pessiot J.F, Kim H, Fujibuchi W.

Pairwise ranking component analysis. Knowledge and Information Systems. 36(2): 459-487 (2013).

Aburatani S, Fujibuchi W, Yamane J, Imanishi S, Nagano R, Sone H, Ohsako S.

Inference of Gene Regulatory Networks to Detect Toxicity-Specific Effects in Human Embryonic Stem Cells. International Journal on Advances in Life Sciences. 5(1&2): 103-114 (2013).

Pessiot J.F, Wong P.S, Maruyama T, Morioka R, Aburatani S, Tanaka M, Fujibuchi W.

The impact of collapsing data on microarray analysis and DILI prediction. Systems Biomedicine. 1(2): 137-143 (2013).

Kinouchi M, Miura K, Mizoi T, Ishida K, Fujibuchi W, Sasaki H, Ohnuma S, Saito K, Katayose Y, Naitoh T, Motoi F, Shiiba K, Egawa S, Shibata C, Unno M.

Infiltration of CD40-positive tumor-associated macrophages indicates a favorable prognosis in colorectal cancer patients. Hepato-Gastroenterology. 60(121): 83-88 (2013).

Aburatani S, Fujibuchi W.

Inference of Specific Gene Regulation by Environmental Chemicals in Human Embryonic Stem Cells. Journal of Molecular Biology Research. 2(1): 54-64 (2012).

Miura K, Fujibuchi W, Unno M.

Review: Splice isoforms as therapeutic targets for colorectal cancer. Carcinogenesis. 33(12): 2311-2319 (2012).

Aburatani S, Fujibuchi W.

Application of Structural Equation Modeling for Inferring Toxicity-Dependent Regulation in Human Embryonic Stem Cells. Proceeding of GLOBAL HEALTH 2012, The First International Conference on Global Health Challenges, 27-32, Venice, Italy. (2012).

Miura K, Fujibuchi W, Unno M.

Review: Splice variants in apoptotic pathway. Experimental Oncology. 34(3): 212-217 (2012).

He X, Imanishi S, Sone H, Nagano R, Qin X.Y, Yoshinaga J, Akanuma H, Yamane J, Fujibuchi W, Ohsako S.

Effects of methylmercury exposure on neuronal differentiation of mouse and human embryonic stem cells. Toxicology Letters. 212(1): 1-10 (2012).

Pessiot J.F, Wong P.S, Maruyama T, Morioka R, Aburatani S, Tanaka M, Fujibuchi W.

The impact of collapsing data on microarray analysis and DILI prediction. Proceedings of Critical Assessment of Massive Data Analysis 2012 (CAMDA2012). (2012).

Miura K, Ishida K, Fujibuchi W, Ito A, Niikura H, Ogawa H, Sasaki I.

Review: Differentiating rectal carcinoma by an immunohistological analysis of carcinomas of pelvic organs based on the NCBI Literature Survey and the Human Protein Atlas database. Surgery Today. 42(6): 515-525 (2012).

Hamada S, Satoh K, Fujibuchi W, Hirota M, Kanno A, Unno J, Masamune A, Kikuta K, Kume K, Shimosegawa T.

MiR-126 acts as a tumor suppressor in pancreatic cancer cells via the regulation of ADAM9. Molecular Cancer Research. 10(1): 3-10(2012).

Fujibuchi W, Aburatani S, Yamane J, Imanishi S, Akanuma H, Sone H, Ohsako S.

Prediction of Chemical Toxicity by Network-based SVM on ES-cell Validation System The Proceedings of the 2011 Joint Conference of CBI-Society and JSBi, Kobe (2011).

Hatano A, Chiba H, Moesa H.A, Taniguchi T, Nagaie S, Yamanegi K, Takai-Igarashi T, Tanaka H, Fujibuchi W.

CELLPEDIA: a repository for human cell information for cell studies and differentiation analyses Database (Oxford). bar046 (2011).

Sugihara M, Fujibuchi W, Suwa M.

Structural elements of the signal propagation pathway in squid rhodopsin and bovine rhodopsin. The Journal of Physical Chemistry B. 115(19): 6172-6179 (2011).

Kinouchi M, Miura K, Mizoi T, Ishida K, Fujibuchi W, Ando T, Yazaki N, Saito K, Shiiba K, Sasaki I.

Infiltration of CD14-positive macrophages at the invasive front indicates a favorable prognosis in colorectal cancer patients with lymph node metastasis. Hepato-Gastroenterology. 58(106): 352-358 (2011).

Miura K, Fujibuchi W, Ishida K, Naitoh T, Ogawa H, Ando T, Yazaki N, Watanabe K, Haneda S, Shibata C, Sasaki I.

Invited Review: Inhibitor of apoptosis protein family as diagnostic markers and therapeutic targets of colorectal cancer. Surgery Today. 41(2): 175-182 (2011).

Miura K, Fujibuchi W, Sasaki I.

Review: Alternative pre-mRNA splicing in digestive tract malignancy. Cancer Science. 102(2): 309-316 (2011).

Wijaya E, Pessiot J.F, Frith M.C, Fujibuchi W, Asai K, Horton P.

In search of true reads: A classification approach to next generation sequencing data selection. International Conference on Bioinformatics and Biomedicine Workshops (BIBMW). 37: 561-566 (2010).

Miura K, Kinouchi M, Ishida K, Fujibuchi W, Naitoh T, Ogawa H, Ando T, Yazaki N, Watanabe K, Haneda S, Shibata C, Sasaki I.

5-FU metabolism in cancer and orally-administrable 5-FU drugs. Cancers (Basel). 2(3): 1717-1730 (2010).

Pessiot J.F, Chiba H, Hyakkoku H, Taniguchi T, Fujibuchi W.

PeakRegressor identifies composite sequence motifs responsible for STAT1 binding sites and their potential rSNPs PLoS One. 5(8): e11881 (2010).

Tochigi Y, Sato N, Sahara T, Wu C, Saito S, Irie T, Fujibuchi W, Goda T, Yamaji R, Ogawa M, Ohmiya Y, Ohgiya S.

Sensitive and convenient yeast reporter assay for high-throughput analysis by using a secretory luciferase from Cypridina noctiluca. Analytical Chemistry. 82(13): 5768-5776 (2010).

Sone H, Okura M, Zaha H, Fujibuchi W, Taniguchi T, Akanuma H, Nagano R, Ohsako S, Yonemoto J.

Profiles of Chemical Effects on Cells (pCEC): a toxicogenomics database with a toxicoinformatics system for risk evaluation and toxicity prediction of environmental chemicals. The Journal of Toxicological Sciences. 35(1): 115-123 (2010).

Pessiot J.F, Chiba H, Hyakkoku H, Taniguchi T, Fujibuchi W.

PeakRegressor identifies composite sequence motifs responsible for STAT1 binding sites and their potential rSNPs Proceedings of Critical Assessment of Massive Data Analysis 2009 (CAMDA 2009). 4-11, Chicago (2009).

Fujibuchi W, Chiba H, Akiyama H, Shiku H.

Designing Pyro-Primer Sequences Using a Simulated Annealing Algorithm, to Critically Target mRNAs in Quantitative Cell Analysis Proceedings of the 6'th International Forum on Post-genome Technologies (IFPT'6). 253-257, Beijing (2009).

Karasawa H, Miura K, Fujibuchi W, Ishida K, Kaneko N, Kinouchi M, Okabe M, Ando T, Murata Y, Sasaki H, Takami K, Yamamura A, Shibata C, Sasaki I.

Down-regulation of cIAP2 enhances 5-FU sensitivity through the apoptotic pathway in human colon cancer cells Cancer Science. 100(5): 903-913 (2009).

Hamada S, Satoh K, Hirota M, Fujibuchi W, Kanno A, Umino J, Ito H, Satoh A, Kikuta K, Kume K, Masamune A, Shimosegawa T.

Expression of the calcium-binding protein S100P is regulated by bone morphogenetic protein in pancreatic duct epithelial cell lines Cancer Science. 100(1): 103-110 (2009).

Ohnuma S, Miura K, Horii A, Fujibuchi W, Kaneko N, Gotoh O, Nagasaki H, Mizoi T, Tsukamoto N, Kobayashi T, Kinouchi M, Okabe M, Sasaki H, Shiiba K, Miyagawa K, Sasaki I.

Cancer-associated splicing variants of the CDCA1 and MSMB genes expressed in cancer cell lines and surgically resected gastric cancer tissues Surgery. 145(1): 57-68 (2009).

Satoh K, Hamada S, Kimura K, Kanno A, Hirota M, Umino J, Fujibuchi W, Masamune A, Tanaka N, Miura K, Egawa S, Motoi F, Unno M, Vonderhaar B.K, Shimosegawa T.

Up-Regulation of MSX2 Enhances the Malignant Phenotype and Is Associated with Twist 1 Expression in Human Pancreatic Cancer Cells The American Journal of Pathology. 172(4): 926-939 (2008).

Sasaki H, Miura K, Horii A, Kaneko N, Fujibuchi W, Kiseleva L, Gu Z, Murata Y, Karasawa H, Mizoi T, Kobayashi T, Kinouchi M, Ohnuma S, Yazaki N, Unno M, Sasaki I.

Orthotopic implantation mouse model and cDNA microarray analysis indicates several genes potentially involved in lymph node metastasis of colorectal cancer Cancer Science. 99(4): 711-719 (2008).

Horton P, Fujibuchi W.

An upper bound on the hardness of exact matrix based motif discovery. Journal of Discrete Algorithms. 5(4): 706-713 (2007).

Fujibuchi W, Kiseleva L, Taniguchi T, Harada H, Horton P.

CellMontage: Similar Expression Profile Search Server Bioinformatics 23(22): 3103-3104 (2007).

Fujibuchi W, Kato T.

Classification of Heterogeneous Microarray Data by Maximum Entropy Kernel BMC Bioinformatics. 8(267) (2007).

Okada Y, Fujibuchi W. Horton P.

A biclustering method for gene expression module discovery using a closed itemset enumeration algorithm IPSJ Transactions on Bioinformatics 48(SIG 5(TBIO2)). 39-48 (2007).

Okada Y, Fujibuchi W, Horton P.

Exhaustive search of maximal biclusters in gene expression data IAENG. 2-1: 307-312 (2007).

Okada Y, Okubo K, Horton P, Fujibuchi W.

Exhaustive Search Method of Gene Expression Modules and Its Application to Human Tissue Data IAENG International Journal of Computer Science. 34(1): 119-126 (2007).

Okada Y, Fujibuchi W.

Mining a Large-scale Microarray Database for Similar Gene Expression Modules to Find Distant Relationships between Down Syndrome and Huntington's Disease Proceedings of Critical Assessment of Microarray Data Analysis 07. Valencia, Spain (2007).

Kato T, Murata Y, Miura K, Asai K, Horton P.B, Tsuda K, Fujibuchi W.

Network-based de-noising improves prediction from microarray data BMC Bioinformatics. 7(Suppl. 1): S4 (2006).

Polouliakh N, Natsume T, Harada H, Fujibuchi W, Horton P.

Comparative genomic analysis of transcription regulation elements involved in human MAP-kinase G-protein coupling pathway Journal of Bioinformatics and Computational Biology. 4(2): 469-482 (2006).

Kato T, Fujibuchi W, Asai K.

Learning Kernels from Distance Constraints IPSJ. 47(SIG10): 1-11 (2006).

Horton P.B, Kiseleva L, Fujibuchi W.

RaPiDS: An Algorithm for Rapid Expression Profile Database Search Genome Informatics. 17(2): 67-76 (2006).

Kato T, Fujibuchi W, Asai K.

Kernel analysis for noisy microarray data CBRC Technical Report. AIST02-J00001-8 (2006).

Kato T, Murata Y, Miura K, Asai K, Horton P.B, Tsuda K, Fujibuchi W.

Drug-response prediction from microarray data using network-based de-noising IPSJ SIG technical reports 2006. 47-52 BIO-5-(8) (2006).

Kato T, Fujibuchi W, Asai K.

Kernel construction from distance constraints CBRC Technical Report. AIST02-J00001-7 (2005).

Barrett T, Suzek T.O, Troup D.B, Wilhite S.E, Ngau W.C, Ledoux P, Rudnev D, Lash A.E, Fujibuchi W, Edgar R.

NCBI GEO: mining millions of expression profiles - database and tools Nucleic Acids Research. 33 (Database issue): D562-566 (2005).

Ono Y, Fujibuchi W, Suwa M.

Automatic gene collection system for genome-scale overview of G-protein coupled receptors in Eukaryotes Gene. 364: 63-73 (2005).

Horton P, Fujibuchi W.

An Upper Bound on the Hardness of Exact Matrix Based Motif Discovery Combinatorial Pattern Matching. 16th Annual Symposium 3537: 219-228 (2005).

Fujibuchi W, Anderson J.S, Landsman D.

PROSPECT improves cis-acting regulatory element prediction by integrating expression profile data with consensus pattern searches Nucleic Acids Research. 29(19): 3988-3996 (2001).

Fujibuchi W, Ogata H, Matsuda H, Kanehisa M.

Automatic detection of conserved gene clusters in multiple genomes by graph comparison and P-quasi grouping Nucleic Acids Research. 28(20): 4029-4036 (2000).

Ogata H, Fujibuchi W, Goto S, Kanehisa M.

A heuristic graph comparison algorithm and its application to detect functionally related enzyme clusters Nucleic Acids Research. 28(20): 4021-4028 (2000).

Ogata H, Goto S, Sato K, Fujibuchi W, Bono H, Kanehisa M.

KEGG: Kyoto Encyclopedia of Genes and Genomes Nucleic Acids Research. 27(1): 29-34 (1999).

Ogata H, Goto S, Fujibuchi W, Kanehisa M.

Computation with the KEGG pathway database BioSystems. 47(1-2): 119-128 (1998).

Bono H, Goto S, Fujibuchi W, Ogata H, Kanehisa M.

Systematic prediction of orthologous units of genes in the complete genomes. Genome Informatics. Workshop on Genome Informatics. 9: 32-40 (1998).

Fujibuchi W, Sato K, Ogata H, Goto S, Kanehisa M.

KEGG and DBGET/LinkDB: Integration of biological relationships in divergent molecular biology data AAAI Technical Report WS-98-04. 35-40 (1998).

Fujibuchi W, Goto S, Migimatsu H, Uchiyama I, Ogiwara A, Akiyama Y, Kanehisa M.

DBGET/LinkDB: an integrated database retrieval system Pacific Symposium on Biocomputing 1998. 683-694 (1998).

Fujibuchi W, Kanehisa M.

Prediction of gene expression specificity by promoter sequence patterns DNA Research. 4(2): 81-90 (1997).

Ogata H, Fujibuchi W, Kanehisa M.

The size differences among mammalian introns are due to the accumulation of small deletions FEBS Letters. 390(1): 99-103 (1996).

Ogata H, Bono H, Fujibuchi W, Goto S, Kanehisa M.

Analysis of binary relations and hierarchies of enzymes in the metabolic pathways Proc. 7th Workshop on Genome Informatics. 128-136 (1996).

Goto S, Bono H, Ogata H, Fujibuchi W, Nishioka T, Sato K, Kanehisa M.

Organizing and computing metabolic pathway data in terms of binary relations Pacific Symposium on Biocomputing '97. 175-186 (1997).

Fujibuchi W, Kanehisa M.

A method to extract functional motifs for transcriptional regulation in eukaryotic sequences Bulletin of the Institute for Chemical Research. Kyoto University. 71(3): 317-326 (1993).
著作物

Takahashi H, Qin XY, Sone H, and Fujibuchi W

Stem Cell-Based Methods to Predict Developmental Chemical Toxicity Computational Toxicology : 475-483 Springer Nature (2018)

山根 順子、藤渕 航

ヒトES/iPS細胞を用いた新しい簡易毒性試験とコンソーシアムの実現に向けて ILSI JAPAN No.133: 24-30 (2018)

髙橋 弘樹、藤渕 航

ES細胞と遺伝子ネットワークを用いた機械学習による毒性予測システム 医歯薬出版 医学のあゆみ 262(11): 1033-1034 (2017)

森 智弥、藤渕 航

「精密細胞分類に基づく幹細胞・分化細胞の評価」 実験医学増刊 34(17): 174-180, 羊土社 (2016).

桜井 都衣、藤渕 航

「iPS細胞と元素周期表の密接な関係」 海洋化学研究 29(1): 17-23, 海洋化学研究所 (2016).

加藤 有己、桜井 都衣、藤渕 航

「ヒト細胞からのビッグデータの情報管理と情報解析技術」 ビッグデータの収集、調査、分析と活用事例 249-254, 技術情報協会 (2014).

植田 充美/監 藤渕 航、他

「iPS細胞からのビッグデータの情報セキュリティと創薬、医療への活用」 生命のビッグデータ利用の最前線 176-184, シーエムシー出版 (2014).

秋山 徹/監 井元 清哉、河府 和義、藤渕 航/編

「バイオ実験に絶対使える 統計の基本Q&A」 羊土社 (2012).

千葉 啓和、藤渕 航

「細胞情報解析に役立つツール―幹細胞研究の進展とその創薬応用に向けて」 実験医学 28(19): 3171-3174, 羊土社 (2010).

Kato T, and Fujibuchi W.

Kernel classification methods for cancer microarray data Medical Biostatistics for Complex Diseases. 279-303,
WILEY-VCH, Weinheim, Germany (2010).

藤渕 航

「シミュレーテッドアニーリングによる多重プライマー配列デザイン法 ー細胞内mRNA絶対定量に向けてー」 シングルセル解析の最前線 シーエムシー出版 (2010).

Fujibuchi W, Kim H, Okada Y, Taniguchi T, Sone H.

High-performance gene expression module analysis tool and its application to chemical toxicity data Methods in Molecular Biology. 577: 55-65, Humana Press Inc., U.S.A. (2009).

藤渕 航/堀本 勝久(編)

「マイクロアレイ データ統合解析プロトコール」 羊土社 (2008).

藤渕 航, 岡田 吉史

「GSEAによるマイクロアレイデータからの遺伝子機能セットの探索法」 実験医学 25(6): 25-26, 羊土社 (2007).

岡田 吉史、藤渕 航

「GEO」 バイオデータベースとウェブツールの手とり足とり活用法 150-156, 羊土社 (2007).

岡田 吉史、藤渕 航、Paul Horton

「極大2部クリーク列挙法による遺伝子発現モジュールの抽出」 IPSJ SIG Technical Report. 2006-BIO-6, 17-23 (2006).

藤渕 航、Larisa Kiseleva、谷口 丈晃、Paul Horton

「細胞の知識ベース開発と遺伝子発現プロファイルによる細胞種と特徴予測」 IPSJ SIG Technical Report. 2005-BIO-2, 33-37 (2005).

藤渕 航

「Q94 タンパク質の相互作用をインターネットで調べたい」 タンパク質分析(研究)超基本Q&A 233-235, 羊土社 (2005).

Polouliakh Natalia、藤渕 航

「第2章生物学データベース 7.遺伝子発現プロファイルデータベース GEOデータベース」 ゲノム研究実験ハンドブック 羊土社 (2004).

藤渕 航、金久 實

「遺伝子クラスター解析」 別冊数理科学 生命情報科学の拡がり サイエンス社 (2001).

藤渕 航、金久 實

「遺伝子クラスター解析」 数理科学 432: 12-18 サイエンス社 (1999).

藤渕 航

「ゲノムネットのデータベース利用法(第2版)」第二章 共立出版 (1998).

藤渕 航、金久 實

「遺伝子・ゲノム百科事典」 遺伝子医学、1(2), 119-124 (1997).

藤渕 航

「ゲノムネットのデータベース利用法」第一章, 第三章 共立出版 (1996).

中井 謙太、藤渕 航

「インターネットを利用した遺伝情報検索システム最前線」 薬学図書館, 41(4), 359-364 (1996).
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